Ningning Wang*, Andrea Angioi, Nicolas Hanset, Xiaoxue Ye, Shijiu Lu, Yi Zhu.
Ren Fail. 2024 Dec;46(2):2392846. doi: 10.1080/0886022X.2024.2392846. Epub 2024 Sep 5. PMID: 39234636.
PUBLICATIONS
Note: *, co-corresponding; #, co-first author.
Full list of publications:
Full list of publications:
144
Proteomic landscape profiling of primary prostate cancer reveals a 16-protein panel for prognosis prediction
Rui Sun#, Jun A#, Haolan Yu#, Yan Wang#, Miaoxia He#, Lingling Tan, Honghan Cheng, Jili Zhang, Yingrui Wang, Xiaochen Sun, Mengge Lyu, Min Qu, Lingling Huang, Zijian Li, Wenhui Zhang, Kunpeng Ma, Zhenyang Dong, Weigang Ge, Yun Zhang, Xuan Ding, Bo Yang, Jianguo Hou, Chuanliang Xu, Linhui Wang, Yi Zhu, Tiannan Guo*, Xu Gao*, Chenghua Yang*.
Cell Reports Medicine. 2024 Aug 20; 5(8):101679. Doi: https://doi.org/10.1016/j.xcrm.2024.101679. PMID: 39168102.
143
Prediction of overall survival in stage II and III colon cancer through machine learning of rapidly-acquired proteomics
Kailun Xu#, Xiaoyang Yin#, Hui Chen#, Yuhui Huang, Xi Zheng, Biting Zhou, Xue Cai, Huanhuan Gao, Miaomiao Tian, Sijun Hu, Shu Zheng, Changzheng Yuan*, Yongzhan Nie*, Tiannan Guo* & Yingkuan Shao*
Cell Discovery. 2024 Aug 13;10(1):85. doi: 10.1038/s41421-024-00707-7. PMID: 39134531.
142
Proteomic landscape of epithelial ovarian cancer
Liujia Qian#, Jianqing Zhu#, Zhangzhi Xue#, Yan Zhou#, Nan Xiang#, Hong Xu#, Rui Sun, Wangang Gong, Xue Cai, Lu Sun, Weigang Ge, Yufeng Liu, Ying Su, Wangmin Lin, Yuecheng Zhan, Junjian Wang, Shuang Song, Xiao Yi, Maowei Ni, Yi Zhu*, Yuejin Hua*, Zhiguo Zheng*, Tiannan Guo*.
Nature Communications. 2024 Jul 31;15(1):6462. doi: 10.1038/s41467-024-50786-z. PMID: 39085232.
141
Pulmonary and renal long COVID at two-year revisit
Wang J#, Liang X#, Zheng Y#, Zhu Y#, Zhou K#, Wu X#, Sun R, Hu Y, Zhu X, Chi H, Chen S, Lyu M, Xie Y, Yi X, Liu W, Cai X, Li S, Zhang Q, Wu C, Shi Y, Wang D, Peng M, Zhang Y, Liu H, Zhang C, Quan S, Kong Z, Kang Z, Zhu G, Zhu H, Chen S, Liang J, Yang H, Pang J, Fang Y, Chen H*, Li J*, Xu *J, Guo T*, Shen B*.
iScience. 2024 Jun 21;27(7):110344. doi: 10.1016/j.isci.2024.110344. PMID: 39055942; PMCID: PMC11269939.
140
An individualized protein-based prognostic model to stratify pediatric patients with papillary thyroid carcinoma
Zhihong Wang#, He Wang#, Yan Zhou#, Lu Li, Mengge Lyu, Chunlong Wu, Tianen He, Lingling Tan, Yi Zhu, Tiannan Guo, Hongkun Wu*, Hao Zhang* & Yaoting Sun*
Nature Communications. 2024.15: 3560. PMID: 38671151.
139
Proteomic and cellular characterization of Omicron breakthrough infections and a third homologous or heterologous boosting vaccination in a longitudinal cohort
Yi Zhang#, Zhangfan Fu#, Haocheng Zhang, Ke Lin, Jieyu Song, Jingxin Guo, Qiran Zhang, Guanmin Yuan, Hongyu Wang, Mingxiang Fan, Yuanhan Zhao, Rui Sun, Tiannan Guo, Ning Jiang, Chao Qiu, Wenhong Zhang*, Jingwen Ai*
Molecular & Cellular Proteomics. doi.org/10.1016/j.mcpro.2024.100769. PMID: 38641227.
138
Proteomics-derived biomarker panel facilitates distinguishing primary lung adenocarcinomas with intestinal or mucinous differentiation (PAIM) from lung metastatic colorectal cancer (lmCRC)
Jiaying Liu#, Xiaona Chang#, Liujia Qian#, Shuo Chen#, Zhangzhi Xue, Junhua Wu, Danju Luo, Bo Huang, Jun Fan, Tiannan Guo*, Xiu Nie*
Molecular & Cellular Proteomics. doi.org/10.1016/j.mcpro.2024.100766. PMID: 38608841.
137
Proteomic Identification of Small Extracellular Vesicle Proteins LAMB1 and Histone H4 for Prostate Cancer Diagnosis and Risk Stratification
Bairen Pang, Qi Wang, Haotian Chen, Zhihan Liu, Meng Han, Jie Gong, Liang Yue, Xuan Ding, Suying Wang, Zejun Yan, Yingzhi Chen, David Malouf, Joseph Bucci, Tiannan Guo, Cheng Zhou,* Junhui Jiang,* and Yong Li*
Advanced Science. 2024 Apr 8:e2402509. doi: 10.1002/advs.202402509. Epub ahead of print. PMID: 38590132.
136
Plasma and urine proteomics and gut microbiota analysis reveal potential factors affecting COVID-19 vaccination response
Changjiang Hu#, Weichao Hu#, Bo Tang#, Qiyu Bao#, Xingyu Jiang#, Li Tang, He Wang, Lijiao He, Moyang Lv, Yufeng Xiao, Cheng Liu, Xinzhe Li, Yunyi Liu, Jie Li, Guiping Huang, Zhen Dong*, Zhongjun Li*, Tiannan Guo* and Shiming Yang*
iScience. 2024 Jan 8;27(2):108851. doi: 10.1016/j.isci.2024.108851. PMID: 38318387.
135
Integrated multiomic profiling of breast cancer in the Chinese population reveals patient stratification and therapeutic vulnerabilities
Yi-Zhou Jiang#, Ding Ma#, Xi Jin#, Yi Xiao#, Ying Yu#, Jinxiu Shi#, Yi-Fan Zhou, Tong Fu, Cai-Jin Lin, Lei-Jie Dai, Cheng-Lin Liu, Shen Zhao, Guan-Hua Su, Wanwan Hou, Yaqing Liu, Qingwang Chen, Jingcheng Yang, Naixin Zhang, Wen-Juan Zhang, Wei Liu, Weigang Ge, Wen-Tao Yang, Chao You, Yajia Gu, Virginia Kaklamani, François Bertucci, Claire Verschraegen, Anneleen Daemen, Nakul M. Shah, Ting Wang, Tiannan Guo, Leming Shi, Charles M. Perou, Yuanting Zheng*, Wei Huang* & Zhi-Ming Shao*
Nature Cancer. 2024 Apr;5(4):673-690. doi: 10.1038/s43018-024-00725-0. Epub 2024 Feb 12. PMID: 38347143.
134
The 2023 Report on the Proteome from the HUPO Human Proteome Project
Gilbert S Omenn, Lydie Lane, Christopher M Overall, Cecilia Lindskog, Charles Pineau, Nicolle H Packer, Ileana M Cristea, Susan T Weintraub, Sandra Orchard, Michael H A Roehrl, Edouard Nice, Tiannan Guo, Jennifer E Van Eyk, Siqi Liu, Nuno Bandeira, Ruedi Aebersold, Robert L Moritz, Eric W Deutsch.
Journal of Proteome Research. 2024 Jan 17. doi: 10.1021/acs.jproteome.3c00591. Epub ahead of print. PMID: 38232391.
133
Mapping multi-omics characteristics related to short-term PM2.5 trajectory and their impact on type 2 diabetes in middle-aged and elderly adults in Southern China
Jia-Ting Wang#, Wei Hu#, Zhangzhi Xue#, Xue Cai#, Shi-Yu Zhang, Fan-Qin Li, Li-Shan Lin, Hanzu Chen, Zelei Miao, Yue Xi, Tiannan Guo, Ju-Sheng Zheng*, Yu-Ming Chen*, Hua-Liang Lin*.
Journal of Hazardous Materials. 2024 Apr 15;468:133784. doi: 10.1016/j.jhazmat.2024.133784. Epub 2024 Feb 15. PMID: 38382338.
132
In-depth metaproteomics analysis of tongue coating for gastric cancer: a multicenter diagnostic research study
Jiahui Chen#, Yingying Sun#, Jie Li#, Mengge Lyu#, Li Yuan#, Jiancheng Sun, Shangqi Chen, Can Hu, Qing Wei, Zhiyuan Xu*, Tiannan Guo*, Xiangdong Cheng*.
Microbiome. 2024 Jan 8;12(1):6. doi: 10.1186/s40168-023-01730-8. PMID: 38191439.
131
Proteomic profiling of ovarian clear cell carcinomas identifies prognostic biomarkers for chemotherapy
Liang Yue, Tingting Gong, Wenhao Jiang, Liujia Qian, Wangang Gong, Yaoting Sun, Xue Cai, Heli Xu, Fanghua Liu, He Wang, Sainan Li, Yi Zhu, Zhiguo Zheng*, Qijun Wu*, Tiannan Guo*.
Proteomics. 2024 Mar;24(6):e2300242. doi: 10.1002/pmic.202300242. Epub 2024 Jan 3. PMID: 38171885.
130
Alzheimer’s disease early diagnostic and staging biomarkers revealed by large-scale cerebrospinal fluid and serum proteomic profiling
Qing-Qing Tao#, Xue Cai#, Yan-Yan Xue#, Weigang Ge#, Liang Yue, Xiao-Yan Li, Rong-rong Lin, Guo-Ping Peng, Wenhao Jiang, Sainan Li, Kun-Mu Zheng, Bin Jiang, Jian-Ping Jia*, Tiannan Guo*, Zhi-Ying Wu*.
The Innovation. 2024 Jan 2;5(1):100544. doi: 10.1016/j.xinn.2023.100544. PMID: 38235188.
129
Risk stratification of papillary thyroid cancers using multidimensional machine learning
Li, Yuanhui#; Wu, Fan#; Ge, Weigang#; Zhang, Yu #; Hu, Yifan; Zhao, Lingqian; Gou, Wanglong; Shi, Jingjing; Ni, Yeqin; Li, Lu; Fu, Wenxin; Lin, Xiangfeng; Yu, Yunxian; Han, Zhijiang; Chen, Chuanghua; Xu, Rujun; Zhang, Shirong; Zhou, Li; Pan, Gang; Peng, You; Mao, Linlin; Zhou, Tianhan; Zheng, Jusheng; Zheng, Haitao*; Sun, Yaoting*; Guo, Tiannan*; Luo, Dingcun*
International Journal of Surgery. 2024 Jan 1;110(1):372-384. doi: 10.1097/JS9.0000000000000814. PMID: 37916932.
128
Intestinal SURF4 is essential for apolipoprotein transport and lipoprotein secretion
Chun-Guang Guo#, Rui Sun#, Xiao Wang, Ye Yuan, Yan Xu, Shihan Li, Xueting Sun, Jue Wang, Xinli Hu, Tiannan Guo, Xiao-Wei Chen*, Rui-Ping Xiao*, Xiuqin Zhang*
Molecular Metabolism. 2024 Jan;79:101847. doi: 10.1016/j.molmet.2023.101847. Epub 2023 Nov 30. PMID: 38042368.
127
MultiPro: DDA-PASEF and diaPASEF acquired cell line proteomic datasets with deliberate batch effects
He Wang#, Kai Peng Lim#, Weijia Kong#, Huanhuan Gao, Bertrand Jern Han Wong, Ser Xian Phua, Tiannan Guo & Wilson Wen Bin Goh*
Scientific Data. 2023 Dec 2;10(1):858. doi.org/10.1038/s41597-023-02779-8. PMID: 38042886.
126
Proteomic-based stratification of intermediate-risk prostate cancer patients
Qing Zhong#, Rui Sun#, Adel T Aref# , Zainab Noor#, Asim Anees#, Yi Zhu, Natasha Lucas,Rebecca C Poulos, Mengge Lyu, Tiansheng Zhu, Guo-Bo Chen , Yingrui Wang, Xuan Ding, Dorothea Rutishauser, Niels J Rupp, Jan H Rueschoff, Cédric Poyet, Thomas Hermanns, Christian Fankhauser, María Rodríguez Martínez, Wenguang Shao, Marija Buljan, Janis Frederick Neumann, Andreas Beyer, Peter G Hains, Roger R Reddel , Phillip J Robinson, Ruedi Aebersold*, Tiannan Guo*, Peter J Wild*
Life Science Alliance. 2023 Dec 4;7(2):e202302146. doi: 10.26508/lsa.202302146. PMID: 38052461.
125
Multitissue Circadian Proteome Atlas of WT and Per1-/-/Per2-/- mice
Liujia Qian#, Yue Gu#, Qiaocheng Zhai#, Zhangzhi Xue#, Youqi Liu, Sainan Li, Yizhun Zeng, Rui Sun, Qiushi Zhang, Xue Cai, Weigang Ge, Zhen Dong, Huanhuan Gao, Yan Zhou, Yi Zhu*, Ying Xu*, Tiannan Guo*
Molecular & Cellular Proteomics. 2023 Dec;22(12):100675. doi: 10.1016/j.mcpro.2023.100675. PMID: 37940002.
124
Immunotherapy targeting isoDGR-protein damage extends lifespan in a mouse model of protein deamidation
Pazhanichamy Kalailingam, Khalilatul-Hanisah Mohd-Kahliab, SoFong Cam Ngan, Ranjith Iyappan, Evelin Melekh, Tian Lu, Gan Wei Zien, Bhargy Sharma, Tiannan Guo, Adam J MacNeil, Rebecca EK MacPherson, Evangelia Litsa Tsiani, Deborah D O’Leary, Kah Leong Lim, I Hsin Su, Yong-Gui Gao, A Mark Richards, Raj N Kalaria, Christopher P Chen, Neil E McCarthy & Siu Kwan Sze
EMBO Molecular Medicine. 2023 Dec 7;15(12):e18526. doi: 10.15252/emmm.202318526. PMID: 37971164.
123
Proteome-wide profiling reveals dysregulated molecular features and accelerated aging in osteoporosis: A 9.8-year prospective study
Jinjian Xu#, Xue Cai#, Zelei Miao#, Yan Yan#, Danyu Chen, Zhen-xiao Yang, Liang Yue, Wei Hu, Laibao Zhuo, Jia-ting Wang, Zhangzhi Xue, Yuanqing Fu, Ying Xu, Ju-Sheng Zheng*, Tiannan Guo*, Yu-ming Chen*
Aging Cell. 2024 Feb;23(2):e14035. doi: 10.1111/acel.14035. Epub 2023 Nov 16. PMID: 37970652.
122
A pathway activity-based proteomic classifier stratifies prostate tumors into two subtypes
Rui Sun*#, Lingling Tan#, Xuan Ding, Jun A, Zhangzhi Xue, Xue Cai, Sainan Li and Tiannan Guo*
Clinical Proteomics. 2023 Nov 11;20(1):50. doi: 10.1186/s12014-023-09441-w. PMID: 37950160.
121
Forager-farmer transition at the crossroads of East and Southeast Asia 4900 years ago
Minmin Ma#, Minxia Lu#, Rui Sun#, Zhonghua Zhu#, Dorian Q. Fuller, Jianxin Guo, Guanglin He, Xiaomin Yang, Lingling Tan, Yongxiu Lu, Jiajia Dong, Ruiliang Liu, Jishuai Yang, Bo Li, Tiannan Guo, Xiaorui Li, Dongyue Zhao, Ying Zhang, Chuan-Chao Wang*, Guanghui Dong*
Science Bulletin. 2024 Jan 15;69(1):103-113. doi: 10.1016/j.scib.2023.10.015. Epub 2023 Oct 16. PMID: 37914610.
120
Population serum proteomics uncovers a prognostic protein classifier for metabolic syndrome
Xue Cai#, Zhangzhi Xue#, Fang-Fang Zeng#, Jun Tang#, Liang Yue#, Bo Wang#, Weigang Ge, Yuting Xie, Zelei Miao, Wanglong Gou, Yuanqing Fu, Sainan Li, Jinlong Gao, Menglei Shuai, Ke Zhang, Fengzhe Xu, Yunyi Tian, Nan Xiang, Yan Zhou, Peng-Fei Shan, Yi Zhu*, Yu-ming Chen*, Ju-Sheng Zheng*, Tiannan Guo*
Cell Reports Medicine. 2023 Sep 19;4(9). doi: https://doi.org/10.1016/j.xcrm.2023.101172. PMID: 37652016.
119
Longitudinal Serum Proteomics Characterization of CD19-CAR-T Cell Therapy for B-Cell Malignancies
Youming Wang#, Rui Sun#, Weigang Ge, Lei Xue, Qianwen Xu, Hui Xu, Sujun Li, Miaomiao Wu, Tiannan Guo*, Xingbing Wang*
Journal of Proteome Research. 2023 Aug 2;22(9):2985-94. doi: 1021/acs.jproteome.3c00322. PMID: 37531193.
118
A Comparative Analysis of Data Analysis Tools for Data-Independent Acquisition Mass Spectrometry
Fangfei Zhang*, Weigang Ge, Lingling Huang, Dan Li, Lijuan Liu, Zhen Dong, Luang Xu, Xuan Ding, Cheng Zhang, Yingying Sun, Jun A, Jinlong Gao, Tiannan Guo*
Mol Cell Proteomics. 2023 Sep 1;22(9). doi.org/10.1016/j.mcpro.2023.100623. PMID: 37481071.
117
Identifying patients with rapid progression from hormone-sensitive to castration-resistant prostate cancer: a retrospective study
Chenxi Pan#, Yi He#, He Wang#, Yang Yu#, Lu Li, Lingling Huang, Mengge Lyu, Weigang Ge, Tiannan Guo, Bo Yang*, Yaoting Sun*, Zhiyu Liu*
Mol Cell Proteomics. 2023 Sep 1;22(9). doi.org/10.1016/j.mcpro.2023.100613. PMID: 37394064.
116
Dear-DIAXMBD: Deep Autoencoder Enables Deconvolution of Data-Independent Acquisition Proteomics
Qingzu He#, Chuan-Qi Zhong#, Xiang Li#, Huan Guo, Yiming Li, Mingxuan Gao, Rongshan Yu, Xianming Liu, Fangfei Zhang, Donghui Guo, Fangfu Ye, Tiannan Guo, Jianwei Shuai* and Jiahuai Han*
Research. 2023;6:0179. doi: 10.34133/research.0179. PMID: 37377457.
115
Proteome Landscapes of Human Hepatocellular Carcinoma and Intrahepatic Cholangiocarcinoma
Xiao Yi# , Jiang Zhu#, Wei Liu, Li Peng, Cong Lu, Ping Sun, Lingling Huang, Xiu Nie, Shiang Huang, Tiannan Guo* , Yi Zhu*
Molecular & Cellular Proteomics. 2023 Aug 1;22(8). doi.org/10.1016/j.mcpro.2023.100604. PMID: 37353004.
114
Proteomics approaches to long COVID: status and outlooks
Xiao Liang*, Yingrui Wang, Tiannan Guo
Life Medicine, 2023 Jun 1;2(3):lnad023. doi.org/10.1093/lifemedi/lnad023.
113
Proteomic Dynamics of Breast Cancer Cell Lines Identifies Potential Therapeutic Protein Targets
Rui Sun#, Weigang Ge#, Yi Zhu#, Azin Sayad#, Augustin Luna, Mengge Lyu, Shuang Liang, Luis Tobalina, Vinodh N. Rajapakse, Chenhuan Yu, Huanhuan Zhang, Jie Fang, Fang Wu, Hui Xie, Julio Saez-Rodriguez, Huazhong Ying, William C. Reinhold, Chris Sander, Yves Pommier, Benjamin G. Neel*, Ruedi Aebersold*, Tiannan Guo*
Molecular & Cellular Proteomics. 2023 Jun 19:100602. doi.org/10.1016/j.mcpro.2023.100602. PMID: 37343696.
112
Integrative multi-omics deciphers the spatial characteristics of host-gut microbiota interactions in Crohn’s disease
Xiang Gao#, Ruicong Sun#, Na Jiao#, Xiao Liang#, Gengfeng Li, Han Gao, Xiaohan Wu, Muqing Yang, Chunqiu Chen, Xiaomin Sun, Liang Chen, Wei Wu, Yingzi Cong, Ruixin Zhu*, Tiannan Guo*, Zhanju Liu*
Cell Reports Medicine. 2023 Jun 20;4(6):101083. doi: 10.1016/j.xcrm.2023.101083. PMID: 37172588.
111
Mass Spectrometry-based Proteomics of Epithelial Ovarian Cancers: a Clinical Perspective
Liujia Qian, Rui Sun, Zhangzhi Xue, Tiannan Guo*
Molecular & Cellular Proteomics. 2023 Jul 1;22(7). doi: 10.1016/j.mcpro.2023.100578. PMID: 37209814.
110
Multi-omics blood atlas reveals unique features of immune and platelet responses to SARS-CoV-2 Omicron breakthrough infection
Hong Wang#*, Cuicui Liu#, Xiaowei Xie#, Mingming Niu#, Yingrui Wang#, Xuelian Cheng#, Biao Zhang#, Dong Zhang, Mengyao Liu, Rui Sun, Yezi Ma, Shihui Ma, Huijun Wang, Guoqing Zhu, Yang Lu, Baiming Huang, Pei Su, Xiaoyuan Chen, Jingjing Zhao, Hongtao Wang, Long Shen, Lixia Fu, Qianqian Huang, Yang Yang, He Wang, Chunlong Wu, Weigang Ge, Chen Chen, Qianyu Huo, Qingping Wang, Ying Wang, Li Geng, Yan Xie, Yi Xie, Lijun Liu, Jianwei Qi, Huaiyong Chen, Junping Wu, Erlie Jiang, Wentiao Jiang, Ximo Wang*, Zhongyang Shen*, Tiannan Guo*, Jiaxi Zhou*, Ping Zhu*, Tao Cheng*
Immunity. 2023 Jun 13;56(6):1410-1428.e8. doi.org/10.1016/j.immuni.2023.05.007. PMID: 37257450.
109
USP7 represses lineage differentiation genes in mouse embryonic stem cells by both catalytic and noncatalytic activities
Chao Liu#, Lingang Sun#, Yijun Tan, Qi Wang, Tao Luo, Chenlu Li, Nan Yao, Yuting Xie, Xiao Yi, Yi Zhu, Tiannan Guo, Junfeng Ji*
Science Advances. 2023 May 19;9(20):eade3888. doi: 10.1126/sciadv.ade3888. PMID: 37196079.
108
An immunometabolism subtyping system identifies S100A9+ macrophage as an immune therapeutic target in colorectal cancer based on multiomics analysis
Xuanwen Bao#*, Danyang Wang#, Xiaomeng Dai#, Chuan Liu#, Hangyu Zhang, Yuzhi Jin, Zhou Tong, Bin Li, Chuchu Tong, Shan Xin, Xin Li, Yanfang Wang, Lulu Liu, Xudong Zhu, Qihan Fu, Yi Zheng, Jingwen Deng, Weihong Tian, Tiannan Guo, Peng Zhao, Wenbin Chen*, and Weijia Fang*
Cell Reports Medicine. 2023 Apr 18;4(4):100987. doi: 10.1016/j.xcrm.2023.100987. PMID: 36990096.
107
Recent advances of data-independent acquisition mass spectrometry-based proteomics
Tiannan Guo*, Ruedi Aebersold
Proteomics. 2023 Apr;23(7-8):e2200011. doi: 10.1002/pmic.202200011. PMID: 37039310.
106
FOSL2 promotes intertumoral infiltration of T cells and increases pathological complete response rates in locally advanced rectal cancer patients
Kailun Xu#, Xiaoyang Yin#, Biting Zhou, Xi Zheng, Hao Wang, Jing Chen, Xue Cai, Huanhuan Gao, Xiaoming Xu, Liuhong Wang, Li Shen, Tiannan Guo, Shu Zheng*, Baosheng Li*, Yingkuan Shao*, Jian Wang*
Cancer Letters. 2023 May 28;562:216145. doi: 10.1016/j.canlet.2023.216145. PMID: 36997107.
105
Resistance prediction in high-grade serous ovarian carcinoma with neoadjuvant chemotherapy using data-independent acquisition proteomics and an ovary-specific spectral library
Liujia Qian#, Jianqing Zhu#, Zhangzhi Xue#, Tingting Gong#, Nan Xiang, Liang Yue, Xue Cai, Wangang Gong, Junjian Wang, Rui Sun, Wenhao Jiang, Weigang Ge, He Wang, Zhiguo Zheng*, Qijun Wu*, Yi Zhu*, Tiannan Guo*
Molecular Oncology. 2023 Aug;17(8):1567-1580. doi: 10.1002/1878-0261.13410. PMID: 36855266.
104
Genome-wide genotype-serum proteome mapping provides insights into the cross ancestry differences in cardiometabolic disease susceptibility
Fengzhe Xu#, Evan Yi-Wen Yu#, Xue Cai#, Liang Yue#, Li-peng Jing#, Xinxiu Liang#, Yuanqing Fu, Zelei Miao, Min Yang, Menglei Shuai, Wanglong Gou, Congmei Xiao, Zhangzhi Xue, Yuting Xie, Sainan Li, Sha Lu, Meiqi Shi, Xuhong Wang, Wensheng Hu, Claudia Langenberg, Jian Yang, Yu-ming Chen*, Tiannan Guo* & Ju-Sheng Zheng*
Nature Communications. 2023 Feb 16;14(1):896. doi: 10.1038/s41467-023-36491-3. PMID: 36797296.
103
High-Throughput and In-Depth Proteomic Profiling of 5 μL Plasma and Serum Using TMTpro 16-Plex
Yan Zhou#, Rui Sun, Sainan Li, Xiao Liang, Liujia Qian, Liang Yue, Tiannan Guo*
Methods Mol Biol. 2023;2628:81-92. doi: 10.1007/978-1-0716-2978-9_6. PMID: 36781780.
102
Proteomics Investigation of Diverse Serological Patterns in COVID-19
Xiao Liang#, Rui Sun, Jing Wang, Kai Zhou, Jun Li, Shiyong Chen, Mengge Lyu, Sainan Li, Zhangzhi Xue, Yingqiu Shi, Yuting Xie, Qiushi Zhang, Xiao Yi, Juan Pan, Donglian Wang, Jiaqin Xu, Hongguo Zhu, Guangjun Zhu, Jiansheng Zhu, Yi Zhu, Yufen Zheng*, Bo Shen*, and Tiannan Guo*
Molecular & Cellular Proteomics. 22(2): 100493. doi: 10.1016/j.mcpro.2023.100493. PMID: 36621767.
101
Diffuse midline glioma treated with epigenetic agent-based immunotherapy
Linkai Jing#, Zhihong Qian#, Qiang Gao#, Rui Sun, Zili Zhen, Guihuai Wang, Xuejun Yang, Haitao Li, Tiannan Guo & Wei Zhang*
Signal Transduction and Targeted Therapy. 2023 Jan 20;8(1):23. doi: 10.1038/s41392-022-01274-7. PMID: 36658142.
100
Longitudinal proteomic investigation of COVID-19 vaccination
Yingrui Wang#, Qianru Zhu#, Rui Sun#, Xiao Yi#, Lingling Huang, Yifan Hu, Weigang Ge, Huanhuan Gao, Xinfu Ye, Yu Song, Li Shao, Yantao Li, Jie Li*, Tiannan Guo*, Junping Shi*
Protein & Cell. 2023 Sep 14;14(9):668-682. doi: 10.1093/procel/pwad004. PMID: 36930526.
99
DPHL v2: An updated and comprehensive DIA pan-human assay library for quantifying more than 14,000 proteins
Zhangzhi Xue#, Tiansheng Zhu#, Fangfei Zhang, Cheng Zhang, Nan Xiang, Liujia Qian, Xiao Yi, Yaoting Sun, Wei Liu, Xue Cai, Linyan Wang, Xizhe Dai, Liang Yue, Lu Li, Thang V. Pham, Sander R.Piersma, Qi Xiao, Meng Luo, Cong Lu, Jiang Zhu, Yongfu Zhao, Guangzhi Wang, Junhong Xiao, Tong Liu, Zhiyu Liu, Yi He, Qijun Wu,Tingting Gong, Jianqin Zhu, Zhiguo Zheng, Juan Ye, Yan Li , Connie R.Jimenez*, Jun A*, Tiannan Guo*
Patterns. 2023 Jul 5;4(7):100792. doi: 10.1016/j.patter.2023.100792. PMID: 37521047.
98
FAM3C in circulating tumor-derived extracellular vesicles promotes non-small cell lung cancer growth in secondary sites
Win Lwin Thuya#, Li Ren Kong#, Nicholas L. Syn#, Ling-Wen Ding#, Esther Sok Hwee Cheow, Regina Tong Xin Wong, Tingting Wang, Robby Miguel Wen-Jing Goh, Hongyan Song, Migara K. Jayasinghe, Minh TN Le, Jian Cheng Hu, Wei-Peng Yong, Soo-Chin Lee, Andrea Li-Ann Wong, Gautam Sethi, Huynh The Hung, Paul Chi-Lui Ho, Jean-Paul Thiery, Siu Kwan Sze, Tiannan Guo, Ross A. Soo, Henry Yang, Yaw Chyn Lim, Lingzhi Wang*, Boon-Cher Goh*
Theranostics. 2023; 13(2): 621-638. doi: 10.7150/thno.72297. PMID: 36632230.
97
Cross-regulome profiling of RNA polymerases highlights the regulatory role of polymerase III on mRNA transcription by maintaining local chromatin architecture
Yongpeng Jiang#, Jie Huang#, Kai Tian, Xiao Yi, Haonan Zheng, Yi Zhu, Tiannan Guo and Xiong Ji*
Genome Biology. 2022 Nov 28;23(1):246. doi: 10.1186/s13059-022-02812-w. PMID: 36443871.
96
Spatially resolved proteomics via tissue expansion
Lu Li#, Cuiji Sun#, Yaoting Sun#, Zhen Dong#, Runxin Wu, Xiaoting Sun, Hanbin Zhang, Wenhao Jiang, Yan Zhou, Xufeng Cen, Shang Cai, Hongguang Xia, Yi Zhu, Tiannan Guo* & Kiryl D. Piatkevich*
Nature Communications. 2022 Nov 30;13(1):7242. doi: 10.1038/s41467-022-34824-2. PMID: 36450705.
95
The 2022 Report on the Human Proteome from the HUPO Human Proteome Project
Gilbert S. Omenn*, Lydie Lane, Christopher M. Overall, Charles Pineau, Nicolle H. Packer, Ileana M. Cristea, Cecilia Lindskog, Susan T. Weintraub, Sandra Orchard, Michael H. A. Roehrl, Edouard Nice, Siqi Liu, Nuno Bandeira, Yu-Ju Chen, Tiannan Guo, Ruedi Aebersold, Robert L. Moritz, and Eric W. Deutsch
Journal of Proteome Research. 2023 Apr 7;22(4):1024-1042. doi: 10.1021/acs.jproteome.2c00498. PMID: 36318223.